External Data Sources
When indicated by
* in the database, data not belonging to
Platynereis dumerilii as well as expression data from late stages was incorporated from the following sources:
- Platynereis dumerilii. Late Stages RNA-seq data:
Conzelmann M. Williams EA, Krug K, Franz-Wachtel M, Macek B, Jékely
The neuropeptide complement of the marine annelid Platynereis dumerilii.
BMC Genomics 2013; 14:906. doi: 10.1186/1471-2164-14-906.
- Capitella teleta, Helobdella robusta, Lottia gigantea, Daphnia pulex, Saccoglossus kowalevskii,Xenopus tropicalis, Nematostella vectensis,
Amphimedon queenslandica,Trichoplax adherens, Monosiga brevicollis, Branchiostoma floridae:
Nordberg H, Cantor M, Dusheyko S, Hua S, Poliakov A, Shabalov I et al.
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates.
Nucleic Acids Res 2014;42(Database issue):D26-‐31. doi:10.1093/nar/gkt1069.
- Crassostrea gigas:
Zhang G, Fang X, Guo X, Li L, Luo R, Xu F et al.
The oyster genome reveals stress adaptation and complexity of shell formation.
Nature. 2012;490(7418):49-‐54. doi:10.1038/nature11413.
- Tribolium castaneum:
Tribolium Genome Sequencing C, Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R et al.
The genome of the model beetle and pest Tribolium castaneum.
Nature. 2008;452(7190):949-‐55. doi:10.1038/nature06784.
- Drosophila melanogaster:
Attrill H, Falls K, Goodman JL, Millburn GH, Antonazzo G, Rey AJ et al.
FlyBase: establishing a Gene Groug resource for Drosophila melanogaster.
Nucleic Acids Res. 2015. doi:10.1093/nar/gkv1046.
- Strongylocentrotus purpuratus:
Cameron RA, Samanta M, Yuan A, He D, Davidson E.
SpBase: the sea urchin genome database and web site.
Nucleic Acids Res. 2009;37(Database issue):D750-‐4. doi:10.1093/nar/gkn887.
- Danio rerio, Homo sapiens:
Flicek P, Amode MR, Barrell D, Beal K, Billis K, Brent S et al.
Ensembl 2014.
Nucleic Acids Res. 2014;42(Database issue):D749-‐55. doi:10.1093/nar/gkt1196.